BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018F07SP1|AL427353
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1683 1837 0.0
>3x_Contig1683
Length = 16378
Score = 1837 bits (925), Expect = 0.0
Identities = 956/963 (99%), Gaps = 4/963 (0%)
Strand = Plus / Minus
Query: 1 gatccccaagtcttcaatccaaggttgtccgatgtcaaagctggctcgtatcaatttaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 13493 gatccccaagtcttcaatccaaggttgtccgatgtcaaagctggctcgta-caatttaat 13435
Query: 61 tgaagtatccaagccttccagcttaaacgttcgggtcatggagggctgtgcagttctacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13434 tgaagtatccaagccttccagcttaaacgttcgggtcatggagggctgtgcagttctacc 13375
Query: 121 gcaacgctcagagatcctcgaactagcttgttgtaaaatctgattagygagctcattgga 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13374 gcaacgctcagagatcctcgaactagcttgttgtaaaatctgattagcgagctcattgga 13315
Query: 181 gctagtttcatatttcgataagatagttgtgaaatagttcaagagttctgattcggatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13314 gctagtttcatatttcgataagatagttgtgaaatagttcaagagttctgattcggatga 13255
Query: 241 tcgattatggtaaagtgcaggtatttttgtgcaaagatctgagtacgatcgtagtaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13254 tcgattatggtaaagtgcaggtatttttgtgcaaagatctgagtacgatcgtagtaaatt 13195
Query: 301 attgatccattgttcgtaatactttagtgtgagctgtagcatagattctgtcaccccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13194 attgatccattgttcgtaatactttagtgtgagctgtagcatagattctgtcaccccttt 13135
Query: 361 ctcattgcacattttttcccatgtctcatcattctttccttcagcagacttgaaattaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13134 ctcattgcacattttttcccatgtctcatcattctttccttcagcagacttgaaattaac 13075
Query: 421 ttgtgttgcaggctgtaatagcttcagtacggttaatatcacatcaggggcagcatattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13074 ttgtgttgcaggctgtaatagcttcagtacggttaatatcacatcaggggcagcatattg 13015
Query: 481 aacacatggaaggtccaatggctgtatcggaacctctccttctgagggccaggcatcaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13014 aacacatggaaggtccaatggctgtatcggaacctctccttctgagggccaggcatcaac 12955
Query: 541 gtcgaagtcatcgctcaaaggctgaacattattagtatcttgatctgctcgttcaagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12954 gtcgaagtcatcgctcaaaggctgaacattattagtatcttgatctgctcgttcaagaaa 12895
Query: 601 atcaatattgttggatttcgtcacagcgttactacttataaaatccaagggatcaaacga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12894 atcaatattgttggatttcgtcacagcgttactacttataaaatccaagggatcaaacga 12835
Query: 661 gtcagccatcacggcagtttgtacccgatgttttctgctttatcagggtccgattcatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12834 gtcagccatcacggcagtttgtacccgatgttttctgctttatcagggtccgattcatct 12775
Query: 721 cttgagccatccatgtgacaaatcattcacttgaatcgaatatgataattttcaccaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12774 cttgagccatccatgtgacaaatcattcacttgaatcgaatatgataattttcaccaaac 12715
Query: 781 attgaaaatcatacacatgagaaatagtccaataaatacgatatgacaatgtatataaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12714 attgaaaatcatacacatgagaaatagtccaataaatacgatatgacaatgtatataaca 12655
Query: 841 tatatatacattggttctataaaaccgacacagatcgtataaactgtgttaatgc-mcta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 12654 tatatatacattggttctataaaaccgacacagatcgtataaactgtgttaatgcaccta 12595
Query: 900 aagctgctccagaatgaatactcttttcagc-gsatctaca-ctagtttccagtcttttg 957
||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 12594 aagctgctccagaatgaatactcttttcagcagcatctacacctagtttccagtcttttg 12535
Query: 958 tac 960
|||
Sbjct: 12534 tac 12532
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6688
Number of Sequences: 1807
Number of extensions: 6688
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)